BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F10LP1|AL427193
(239 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1262 288 3e-78
3x_Contig1710 153 1e-37
>3x_Contig1262
Length = 7137
Score = 288 bits (145), Expect = 3e-78
Identities = 159/161 (98%), Gaps = 2/161 (1%)
Strand = Plus / Plus
Query: 1 gtgatgggataagtatactgagtgtgttgtgtgtcc-tctcgcaccatctctgcgttgct 59
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6978 gtgatgggataagtatactgagtgtgttgtgtgtccctctcgcaccatctctgcgttgct 7037
Query: 60 gcgggccaatgtagaaaaaagcacagctgcgttaaccttacatccactcaaattccgcca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7038 gcgggccaatgtagaaaaaagcacagctgcgttaaccttacatccactcaaattccgcca 7097
Query: 120 cgaaaatggacatttaccagatatggaaaacccatctctcg 160
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 7098 cgaaaatggacatttaccagatatgg-aaacccatctctcg 7137
>3x_Contig1710
Length = 16151
Score = 153 bits (77), Expect = 1e-37
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 121 gaaaatggacatttaccagatatggaaaacccatctctcgtcttatctgcgaatagaaag 180
||||||||| ||||| ||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 201 gaaaatggaaatttaacagatatggaaaaaaaatatctagtcttatctgcgaatagaaag 260
Query: 181 cggaaaccaggacttagattggattgcacctgaaacaaaggacaattga 229
||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 cggaaaccaggacttagattggattgcccctgaaacaaaggacaattga 309
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1061
Number of Sequences: 1807
Number of extensions: 1061
Number of successful extensions: 14
Number of sequences better than 1.0e-20: 2
length of query: 239
length of database: 10,358,551
effective HSP length: 16
effective length of query: 223
effective length of database: 10,329,639
effective search space: 2303509497
effective search space used: 2303509497
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 49 (97.9 bits)